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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs55731993 chr9:89261706 G/A RXFP2 chr13:32313679-32377525:+ 0.86 8.34 5.78E-13 Box Plot
THYM rs55741473 chr5:176574219 A/G LOC388955 chr2:63849182-63850159:- -0.84 -12.03 8.59E-21 Box Plot
THYM rs57290763 chr18:46326245 C/T FAM66D chr8:11973291-12035059:+ -1.39 -7.12 2.04E-10 Box Plot
THYM rs58145982 chr5:176742562 CA/C LOC388955 chr2:63849182-63850159:- 0.82 10.91 1.9E-18 Box Plot
THYM rs58204904 chr9:78895372 G/A DARS chr2:136664247-136743670:- 1.25 7.27 1.0E-10 Box Plot
THYM rs58381514 chr9:78895396 A/G DARS chr2:136664247-136743670:- 1.25 7.27 1.0E-10 Box Plot
THYM rs58767366 chr9:78895526 T/C DARS chr2:136664247-136743670:- 1.25 7.27 1.0E-10 Box Plot
THYM rs59167097 chr9:78896991 T/TCC DARS chr2:136664247-136743670:- 1.25 7.27 1.0E-10 Box Plot
THYM rs59737888 chr5:176587375 C/T LOC388955 chr2:63849182-63850159:- -0.83 -11.64 5.54E-20 Box Plot
THYM rs59739018 chr9:78895476 G/A DARS chr2:136664247-136743670:- 1.25 7.27 1.0E-10 Box Plot
THYM rs60795901 chr9:78895500 G/A DARS chr2:136664247-136743670:- 1.25 7.27 1.0E-10 Box Plot
THYM rs61311211 chr5:176552468 A/G LOC388955 chr2:63849182-63850159:- -0.71 -10.71 5.18E-18 Box Plot
THYM rs61918866 chr12:20100908 C/T MAGI3 chr1:113933371-114228545:+ -0.93 -7.24 1.16E-10 Box Plot
THYM rs61957424 chr13:52506159 T/C CUL7 chr6:43005355-43021683:- 1.08 7.17 1.64E-10 Box Plot
THYM rs61957425 chr13:52510346 G/A CUL7 chr6:43005355-43021683:- 1.13 7.17 1.65E-10 Box Plot